Here are some open-science projects and tools that I help develop and maintain:
EMG-BIDS Extension Proposal : A proposal to extend the BIDS standard for EMG and high-density EMG data. Pull Request Draft Specification
Stim-BIDS Extension Proposal : A proposal to extend the BIDS standard for stimulus presentation and corresponding annotation. Pull Request Draft Specification
EMGIO : A Python package for EMG data import/export and manipulation. [Documentation] [Repository]
signalJourney : A specification and toolkit for standardizing electrophysiology processing pipeline descriptions. [Documentation] [Repository]
MarkIt-Mistral : A powerful python package and web app for converting PDF documents into Markdown. [WebApp] [Repository]
MATLAB-MCP : A Model Context Protocol (MCP) implementation for MATLAB, giving the LLMs the ability to run sections of code, access to the MATLAB workspace, and the ability understand figures.
HED-MCP : A Model Context Protocol (MCP) implementation for Hierarchical Event Descriptors (HED), giving LLMs the ability to understand HED tags, validate HED annotations, and generate compatible JSON templates.
OpenScience Collective : An initiative to fund the open-science tools using a small portion of grant funding.
EEGManySteps : A community-driven project aimed at standardizing the data collection and analysis workflows for Mobile Brain/Body Imaging (MoBI) experiments.
Image Annotation : An effort to create a standardized framework for annotating images in neuroimaging studies using large language models, starting with the Natural Scene Dataset data.